Tools

Research utilities designed around real experimental workflows.

Plate Analyzer

A browser-based tool for organizing, analyzing, and visualizing 96-well plate experimental data.

96-well workflowspSyn analysisNeuN analysisData visualization
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LCI + ICC Plate Merger

A metadata-driven utility for combining live-cell imaging and fixed-cell imaging plate workflows without duplicating image files.

LCI + ICCMetadata mergePlate workflows
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OligoFCCPRot/AATime (minutes)OCR

Seahorse Analyzer

A streamlined analysis and visualization tool for Seahorse metabolic assay data and mitochondrial functional measurements.

Seahorse assaysOCR / ECARVisualization
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Relative fold changeNormalized expression

qPCR Analyzer

Analyze qPCR experiments with housekeeping normalization, ΔCt/ΔΔCt calculations, fold-change plots, replicate handling, and statistics.

ΔCt / ΔΔCtFold changeStatistics
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Quadrant Video Cropper

Define four arena regions once and batch-crop every video from the same recording-day folder using a shared quadrant layout.

Batch video crop4-arena workflowsShared ROIs
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About these tools

Developed by Yakum B. Mingo to simplify experimental data processing and analysis workflows.